Issues

• Add name property to root data entry in WRROCs

  inab/WfExS-backend#294 · Filter by author paulaidt opened on Sep 30, 2026

• Switch from python-magic to puremagic

  inab/WfExS-backend#271 · Filter by author jmfernandez opened on May 28, 2026
  

• For Nextflow workflows, include snapshot of the downloaded plugins in the WRROC

  enhancement
  Feature

  inab/WfExS-backend#262 · Filter by author jmfernandez opened on Apr 17, 2026 · 1.0
  

• Allow declaring resource restrictions on WRROC import

  bug
  Bug

  inab/WfExS-backend#254 · Filter by author jmfernandez opened on Mar 11, 2026 · 1.0
  

• Transfer resource restrictions to generated Workflow Run RO-Crate

  bugenhancement
  Feature

  inab/WfExS-backend#253 · Filter by author jmfernandez opened on Mar 11, 2026 · 1.0
  

• Improve CI workflows

  enhancement
  Feature

  inab/WfExS-backend#187 · Filter by author jmfernandez opened on Mar 25, 2025

• Support containerized workflow engine execution

  enhancement
  Feature

  inab/WfExS-backend#180 · Filter by author jmfernandez opened on Mar 21, 2025
  

• Explore integration of bwrap for enhanced protections

  enhancement
  inab/WfExS-backend#142 · Filter by author jmfernandez opened on Dec 19, 2024 · 1.1
  

• Explore using bioblend for Galaxy remote workflow execution

  inab/WfExS-backend#130 · Filter by author jmfernandez opened on Nov 6, 2024 · 2.x
  1

  

• Annotate generated images with opencontainers annotations

  inab/WfExS-backend#123 · Filter by author jmfernandez opened on Oct 6, 2024 · 1.0

• Integrate docstr-coverage , in order measure internal code documentation coverage

  inab/WfExS-backend#122 · Filter by author jmfernandez opened on Oct 4, 2024 · 1.0
  

• Restrict max version of Nextflow engine for DSL1 workflows

  inab/WfExS-backend#121 · Filter by author jmfernandez opened on Sep 24, 2024 · 1.0
  

• Allow importing RO-Crates in complex scenarios

  inab/WfExS-backend#114 · Filter by author jmfernandez opened on Aug 28, 2024

• dot dependency should be optional

  inab/WfExS-backend#72 · Filter by author jmfernandez opened on Oct 9, 2023
  

• Introduce codemeta.json

  inab/WfExS-backend#39 · Filter by author jmfernandez opened on Mar 22, 2023

• Use pyinvoke and Fabric

  inab/WfExS-backend#36 · Filter by author jmfernandez opened on Feb 8, 2023 · 2.x

• Add several checks in the code to detect containers unavailable for the current hardware architecture

  inab/WfExS-backend#34 · Filter by author jmfernandez opened on Jan 30, 2023
  

• Add support to dav and davs schemes

  enhancement
  inab/WfExS-backend#25 · Filter by author jmfernandez opened on Feb 25, 2022 · 0.9.x
  1

  

• Record the licence of the workflow in RO-Crate

  inab/WfExS-backend#19 · Filter by author jmfernandez opened on Oct 20, 2021 · 0.9.x
  

• Add support for insdc.sra CURIE

  enhancement
  inab/WfExS-backend#17 · Filter by author jmfernandez opened on Sep 30, 2021 · 0.9.x
  

• Add support to RO-Crate Submission API from WorkflowHub

  enhancement
  inab/WfExS-backend#12 · Filter by author lrodrin opened on Jul 8, 2021 · 0.9.x
  2

• Add validation capabilities over fetched contents

  inab/WfExS-backend#10 · Filter by author jmfernandez opened on Jun 22, 2021
  1

• Fetch and store association from workflow step to container from CWL

  inab/WfExS-backend#8 · Filter by author jmfernandez opened on Jun 2, 2021

• Fetch and store the association process -> container from running Nextflow

  inab/WfExS-backend#7 · Filter by author jmfernandez opened on Jun 2, 2021

• Try generating an abstract CWL from a Nextflow workflow

  inab/WfExS-backend#6 · Filter by author jmfernandez opened on Jun 2, 2021