Python_meets_R

🐍🤖 Tutorial on using R and Python together

Pre-requisites

You will need to have the following installed:

• Rstudio 1.2 recommended
• Anaconda 3

Additional packages:

• reticulate (CRAN) (we recommend doing devtools::install_github("rstudio/reticulate") )
• tidyverse
• readxl
• matplotlib
• scikit-learn
• pandas
• numpy

You can, alternatively, build and run the Docker image in ./deployments/jupyterhub-cluster/image/Dockerfile

$ cd deployments/jupyterhub-cluster/image/

$ docker build --rm -f "Dockerfile" -t <username>/jupyter-rserver:tag

Then to run:

$ docker run --rm -it -p 8888:8888/tcp -e JUPYTER_ENABLE_LAB=yes <username>/jupyter-rserver:tag

This will spin a Jupyter server with all the dependencies and packages needed including Rstudio server.

Tutorial materials

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